ENSTSYG00000004828 (Tarsius syrichta)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSTSYG00000004828 T076500_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.985 0.985
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.985 0.985
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.985 0.985
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTSYP00000004417 MADF 262 329
ENSTSYP00000004417 MADF 426 493
ENSTSYP00000004417 C2H2 ZF 676 698
ENSTSYP00000004417 C2H2 ZF 704 726
ENSTSYP00000004417 C2H2 ZF 732 754
ENSTSYP00000004417 C2H2 ZF 760 782
ENSTSYP00000004417 C2H2 ZF 788 810
ENSTSYP00000004417 C2H2 ZF 816 838

Links

Other C2H2 ZF,MADF family TFs
Other Tarsius syrichta TFs

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63 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action