CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000009836
(
Tarsius syrichta
)
C2H2 ZF,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSTSYG00000009836
T076501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC
GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.981
0.981
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.744
0.744
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.744
0.744
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000008973
MADF
363
424
YETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHMLEPCAFFEDM
ENSTSYP00000008973
MADF
517
584
TRFYDALQACHRKSKLYGAVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDAL
ENSTSYP00000008973
C2H2 ZF
776
798
YKCCVCGKCFGRSRSLIRHQRIH
ENSTSYP00000008973
C2H2 ZF
804
826
FKCLDCGKSFNDSSNFGAHQRIH
ENSTSYP00000008973
C2H2 ZF
832
854
YRCGECGKCFSQSSSLIIHQRTH
ENSTSYP00000008973
C2H2 ZF
860
882
YQCGECGKSFTNSSHFSAHRRVH
ENSTSYP00000008973
C2H2 ZF
888
910
YKCVDCEKSFNNCTRFREHRRIH
ENSTSYP00000008973
C2H2 ZF
916
938
YGCAQCGRHFSKSSILTKHREVH
Links
Other
C2H2 ZF,MADF
family TFs
Other
Tarsius syrichta
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy