CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000014826-D1
(
Bos grunniens
)
C2H2 ZF,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSBTAP00000014826-D1
T076581_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC
GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.725
0.725
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000014826-D1
MADF
363
425
YETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHVLEPCAFFEDMD
ENSBTAP00000014826-D1
MADF
515
584
HETRFYEALQACHRXXKLYGAVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDAL
ENSBTAP00000014826-D1
C2H2 ZF
777
799
SKCSVCGKCFGRSRSLVRHQRIH
ENSBTAP00000014826-D1
C2H2 ZF
805
827
FKCLDCGKSFNDSSNFGAHQRIH
ENSBTAP00000014826-D1
C2H2 ZF
833
855
YRCGECGKCFSQSSSLIIHQRTH
ENSBTAP00000014826-D1
C2H2 ZF
861
883
YQCGDCGRSFTNSSHFSAHRRVH
ENSBTAP00000014826-D1
C2H2 ZF
889
911
YKCVDCEKSFNNCTRFREHRRVH
ENSBTAP00000014826-D1
C2H2 ZF
917
939
YGCSQCGRRFSKSSVLTKHREAH
Links
Other
C2H2 ZF,MADF
family TFs
Other
Bos grunniens
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy