ENSBTAP00000014826-D2 (Bos grunniens)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSBTAP00000014826-D2 T076582_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.955 0.955
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.955 0.955
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.955 0.955
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000014826-D2 MADF 303 372
ENSBTAP00000014826-D2 MADF 468 535
ENSBTAP00000014826-D2 C2H2 ZF 719 741
ENSBTAP00000014826-D2 C2H2 ZF 747 769
ENSBTAP00000014826-D2 C2H2 ZF 775 797
ENSBTAP00000014826-D2 C2H2 ZF 803 825
ENSBTAP00000014826-D2 C2H2 ZF 831 853
ENSBTAP00000014826-D2 C2H2 ZF 859 881

Links

Other C2H2 ZF,MADF family TFs
Other Bos grunniens TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action