ENSBTAP00000014826-D2 (Bos grunniens)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
ENSBTAP00000014826-D2 T076582_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZSCAN29
M04384_2.00
Homo sapiens
MCGYRTARMCGKCTAYRCNN

NNGYRTAGMCGKYTAYRCGK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX
0.955 0.955
ZSCAN29
M08271_2.00
Homo sapiens
YGTCTACRCNGN

NCNGYGTAGACR
ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE
0.955 0.955
ZSCAN29
M04385_2.00
Homo sapiens
MHGYRTAGMCGKCTACACNN

NNGTGTAGMCGKCTAYRCDK
SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX
0.955 0.955
ZKSCAN2
M07562_2.00
Homo sapiens
RRRRRMMAC

GTKTYYYYY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData
0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000014826-D2 MADF 303 372
ENSBTAP00000014826-D2 MADF 468 535
ENSBTAP00000014826-D2 C2H2 ZF 719 741
ENSBTAP00000014826-D2 C2H2 ZF 747 769
ENSBTAP00000014826-D2 C2H2 ZF 775 797
ENSBTAP00000014826-D2 C2H2 ZF 803 825
ENSBTAP00000014826-D2 C2H2 ZF 831 853
ENSBTAP00000014826-D2 C2H2 ZF 859 881

Links

Other C2H2 ZF,MADF family TFs
Other Bos grunniens TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30204.m001816 Ricinus communis 30204.m001816 I 0.000
Aquca_034_00180 Aquilegia coerulea Aquca_034_00180 I 0.000
BGIOSGA005408 Oryza indica BGIOSGA005408 I 0.000
Bo7g003890 Brassica oleracea Bo7g003890 I 0.000
Bostr.7903s0150 Boechera stricta Bostr.7903s0150 I 0.000
BRADI3G54640 Brachypodium distachyon BRADI3G54640 I 0.000
Cagra.0338s0008 Capsella grandiflora Cagra.0338s0008 I 0.000
Cagra.1225s0008 Capsella grandiflora Cagra.1225s0008 I 0.000
Carubv10007459m.g Capsella rubella Carubv10007459m.g I 0.000
Carubv10013621m.g Capsella rubella Carubv10013621m.g I 0.000
cassava2968.m1 Manihot esculenta cassava2968.m1 I 0.000
cassava34241.m1 Manihot esculenta cassava34241.m1 I 0.000
Ca_07691 Cicer arietinum Ca_07691 I 0.000
Ca_12298 Cicer arietinum Ca_12298 I 0.000
Ciclev10019585m.g Citrus clementina Ciclev10019585m.g I 0.000
Cla002793 Citrullus lanatus Cla002793 I 0.000
Cla015231 Citrullus lanatus Cla015231 I 0.000
Cucsa.078700 Cucumis sativus Cucsa.078700 I 0.000
evm.TU.supercontig_8.199 Carica papaya evm.TU.supercontig_8.199 I 0.000
gene08411-v1.0-hybrid Fragaria vesca gene08411-v1.0-hybrid I 0.000
GLYMA02G19000 Glycine max GLYMA02G19000 I 0.000
GLYMA03G32747 Glycine max GLYMA03G32747 I 0.000
GLYMA10G04890 Glycine max GLYMA10G04890 I 0.000
GLYMA11G05810 Glycine max GLYMA11G05810 I 0.000
GLYMA13G19250 Glycine max GLYMA13G19250 I 0.000
Gorai.001G183400 Gossypium raimondii Gorai.001G183400 I 0.000
Gorai.001G234900 Gossypium raimondii Gorai.001G234900 I 0.000
Gorai.007G151900 Gossypium raimondii Gorai.007G151900 I 0.000
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.000
GSMUA_Achr1G16830_001 Musa acuminata GSMUA_Achr1G16830_001 I 0.000
GSMUA_Achr6G30080_001 Musa acuminata GSMUA_Achr6G30080_001 I 0.000
LPERR02G30060 Leersia perrieri LPERR02G30060 I 0.000
Lus10011899.g Linum usitatissimum Lus10011899.g I 0.000
Lus10022833.g Linum usitatissimum Lus10022833.g I 0.000
MDP0000289642 Malus domestica MDP0000289642 I 0.000
mgf008404m Mimulus guttatus mgf008404m I 0.000
MTR_1g069155 Medicago truncatula MTR_1g069155 I 0.000
MTR_7g099540 Medicago truncatula MTR_7g099540 I 0.000
OB02G43130 Oryza brachyantha OB02G43130 I 0.000
OGLUM02G37650 Oryza glumaepatula OGLUM02G37650 I 0.000
OLONG_013198 Oryza longistaminata OLONG_013198 I 0.000
OMERI02G34410 Oryza meridionalis OMERI02G34410 I 0.000
ONIVA02G38510 Oryza nivara ONIVA02G38510 I 0.000
OPUNC02G33630 Oryza punctata OPUNC02G33630 I 0.000
orange1.1g014090m.g Citrus sinensis orange1.1g014090m.g I 0.000
ORGLA02G0316800 Oryza glaberrima ORGLA02G0316800 I 0.000
ORUFI02G37990 Oryza rufipogon ORUFI02G37990 I 0.000
OS02G0805250 Oryza sativa OS02G0805250 I 0.000
Pavir.Ab03239 Panicum virgatum Pavir.Ab03239 I 0.000
Pavir.J11618 Panicum virgatum Pavir.J11618 I 0.000
PGSC0003DMG400018950 Solanum tuberosum PGSC0003DMG400018950 I 0.000
PIF1 Arabidopsis thaliana AT2G20180 D 0.000
PIL5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002562 I 0.000
PK06970.1 Cannabis sativa PK06970.1 I 0.000
POPTR_0002s25410 Populus trichocarpa POPTR_0002s25410 I 0.000
PRUPE_ppa004070mg Prunus persica PRUPE_ppa004070mg I 0.000
SapurV1A.0937s0140 Salix purpurea SapurV1A.0937s0140 I 0.000
Sb04g036450 Sorghum bicolor Sb04g036450 I 0.000
Si017762m.g Setaria italica Si017762m.g I 0.000
Solyc09g063010.2 Solanum lycopersicum Solyc09g063010.2 I 0.000
TCM_003125 Theobroma cacao TCM_003125 I 0.000
Thhalv10001974m.g Eutrema salsugineum Thhalv10001974m.g I 0.000