ENSBTAP00000014826-D2 (Bos grunniens)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		ENSBTAP00000014826-D2 T076582_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.955 0.955
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.955 0.955
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.955 0.955
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000014826-D2 MADF 303 372
ENSBTAP00000014826-D2 MADF 468 535
ENSBTAP00000014826-D2 C2H2 ZF 719 741
ENSBTAP00000014826-D2 C2H2 ZF 747 769
ENSBTAP00000014826-D2 C2H2 ZF 775 797
ENSBTAP00000014826-D2 C2H2 ZF 803 825
ENSBTAP00000014826-D2 C2H2 ZF 831 853
ENSBTAP00000014826-D2 C2H2 ZF 859 881

Links

Other C2H2 ZF,MADF family TFs
Other Bos grunniens TFs

Invalid Input OrderBy

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action