Myotis_brandtii_ZSCAN29_10025802 (Myotis brandtii)
C2H2 ZF,MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg) 		IPR007087
IPR006578 		Myotis_brandtii_ZSCAN29_10025802 T076585_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN29
M04384_2.00 		Homo sapiens
MCGYRTARMCGKCTAYRCNN
NNGYRTAGMCGKYTAYRCGK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_HT-SELEX 		0.981 0.981
ZSCAN29
M08271_2.00 		Homo sapiens
YGTCTACRCNGN
NCNGYGTAGACR		 ChIP-seq
Schmitges et al.(2016)
Q8IWY8_1-4.RCADE 		0.981 0.981
ZSCAN29
M04385_2.00 		Homo sapiens
MHGYRTAGMCGKCTACACNN
NNGTGTAGMCGKCTAYRCDK		 SELEX
Yin et al.(2017)
ZSCAN29_eDBD_Methyl-HT-SELEX 		0.981 0.981
ZKSCAN2
M07562_2.00 		Homo sapiens
RRRRRMMAC
GTKTYYYYY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN2.RCADE.ReprocessedData 		0.730 0.730
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_ZSCAN29_10025802 MADF 143 209
Myotis_brandtii_ZSCAN29_10025802 MADF 306 373
Myotis_brandtii_ZSCAN29_10025802 C2H2 ZF 559 581
Myotis_brandtii_ZSCAN29_10025802 C2H2 ZF 587 609
Myotis_brandtii_ZSCAN29_10025802 C2H2 ZF 615 637
Myotis_brandtii_ZSCAN29_10025802 C2H2 ZF 643 665
Myotis_brandtii_ZSCAN29_10025802 C2H2 ZF 671 693
Myotis_brandtii_ZSCAN29_10025802 C2H2 ZF 699 721

Links

Other C2H2 ZF,MADF family TFs
Other Myotis brandtii TFs

Invalid Input OrderBy

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action