CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30033961m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF,MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00319 (SRF-TF)
IPR007087
IPR002100
Sakowv30033961m.g
T076633_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23923420_peptide
MADS box
18
65
YIEDDLERLHTKLRIKEILFCKAHELSQLLECSVFVKVVEPSSAAEYY
23923420_peptide
C2H2 ZF
299
322
YNCEDCNSSFTTSRHLSAHLKRAH
23923420_peptide
C2H2 ZF
327
350
YSCTDCNRKLKCKNAYIRHMKNAH
23923420_peptide
C2H2 ZF
383
404
FLCDICGKSFSSRNNLKTHKIS
23923420_peptide
C2H2 ZF
416
439
TKCSICEVQFQSVISLQSHIRSDH
23923420_peptide
C2H2 ZF
444
466
FQCKTCGKGFRYKSNLVSHLLVH
23923420_peptide
C2H2 ZF
514
536
HKCDVCNRGFCTKSNLEVHKKTH
23923420_peptide
C2H2 ZF
542
564
YTCDICKRGFLLLRNLNEHMISH
23923420_peptide
C2H2 ZF
570
592
CQCDVCGLFFRNSAALGTHKRTH
23923420_peptide
C2H2 ZF
615
637
FKCNICDKVFRLKCGVKNHLLVH
23923420_peptide
C2H2 ZF
685
707
HTCDECDRGFCSEANLELHKKSH
23923420_peptide
C2H2 ZF
713
735
FSCHICKRGFILQHNLNEHMKKH
23923420_peptide
C2H2 ZF
741
763
IQCDTCGKLFINFSALIAHQLTH
23923420_peptide
C2H2 ZF
769
792
QKCELCAKEFSSLNALKIHTAVIH
23923420_peptide
C2H2 ZF
800
822
LKCELCTKSFKTETQMGIHLARH
23923420_peptide
C2H2 ZF
828
850
FECGECGKSFKYVNGLKVHKLKH
23923420_peptide
C2H2 ZF
856
879
YKCEECGAAYQGMTHLKLHKKKFH
23923420_peptide
C2H2 ZF
899
921
YKCDLCGKAYSTVQSLEKHQLWH
23923420_peptide
C2H2 ZF
927
949
FSCQECGRGFLLEYNYKEHLKIH
23923420_peptide
C2H2 ZF
955
978
QKCSKCDKAFCNFSALEAHTRSAH
23923420_peptide
C2H2 ZF
984
1007
YFCEHCGKTFHQLTRLKLHITFAH
23923421_peptide
MADS box
17
64
YIEDDLERLHTKLRIKEILFCKAHELSQLLECSVFVKVVEPSSAAEYY
23923421_peptide
C2H2 ZF
298
321
YNCEDCNSSFTTSRHLSAHLKRAH
23923421_peptide
C2H2 ZF
326
349
YSCTDCNRKLKCKNAYIRHMKNAH
23923421_peptide
C2H2 ZF
382
403
FLCDICGKSFSSRNNLKTHKIS
23923421_peptide
C2H2 ZF
415
438
TKCSICEVQFQSVISLQSHIRSDH
23923421_peptide
C2H2 ZF
443
465
FQCKTCGKGFRYKSNLVSHLLVH
23923421_peptide
C2H2 ZF
513
535
HKCDVCNRGFCTKSNLEVHKKTH
23923421_peptide
C2H2 ZF
541
563
YTCDICKRGFLLLRNLNEHMISH
23923421_peptide
C2H2 ZF
569
591
CQCDVCGLFFRNSAALGTHKRTH
23923421_peptide
C2H2 ZF
614
636
FKCNICDKVFRLKCGVKNHLLVH
23923421_peptide
C2H2 ZF
684
706
HTCDECDRGFCSEANLELHKKSH
23923421_peptide
C2H2 ZF
712
734
FSCHICKRGFILQHNLNEHMKKH
23923421_peptide
C2H2 ZF
740
762
IQCDTCGKLFINFSALIAHQLTH
23923421_peptide
C2H2 ZF
768
791
QKCELCAKEFSSLNALKIHTAVIH
23923421_peptide
C2H2 ZF
799
821
LKCELCTKSFKTETQMGIHLARH
23923421_peptide
C2H2 ZF
827
849
FECGECGKSFKYVNGLKVHKLKH
23923421_peptide
C2H2 ZF
855
878
YKCEECGAAYQGMTHLKLHKKKFH
23923421_peptide
C2H2 ZF
898
920
YKCDLCGKAYSTVQSLEKHQLWH
23923421_peptide
C2H2 ZF
926
948
FSCQECGRGFLLEYNYKEHLKIH
23923421_peptide
C2H2 ZF
954
977
QKCSKCDKAFCNFSALEAHTRSAH
23923421_peptide
C2H2 ZF
983
1006
YFCEHCGKTFHQLTRLKLHITFAH
Links
Other
C2H2 ZF,MADS box
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action