CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA028876
(
Oryza indica
)
C2H2 ZF,MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF01429 (MBD)
IPR007087
IPR001739
BGIOSGA028876
T076635_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA028876-PA
MBD
208
270
GDHLPSGWRLQLGIERKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
BGIOSGA028876-PA
C2H2 ZF
327
350
YECQQCNLTFHGQSAYAHHLITFH
BGIOSGA028876-PA
C2H2 ZF
376
398
FECPVCNKTFEEQSRYFGHIGSH
Links
Other
C2H2 ZF,MBD
family TFs
Other
Oryza indica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS08G0485600
Oryza sativa
OS08G0485600
N
1.000
OBART08G18610
Oryza barthii
OBART08G18610
N
1.000
ONIVA08G20630
Oryza nivara
ONIVA08G20630
N
0.982
BGIOSGA028878
Oryza indica
BGIOSGA028878
N
0.982
OGLUM08G19590
Oryza glumaepatula
OGLUM08G19590
N
0.982
OGLUM08G19580
Oryza glumaepatula
OGLUM08G19580
N
0.982
OS08G0485700
Oryza sativa
OS08G0485700
N
0.982
OLONG_006294
Oryza longistaminata
OLONG_006294
N
0.972
OPUNC08G16580
Oryza punctata
OPUNC08G16580
N
0.910
OB08G25720
Oryza brachyantha
OB08G25720
N
0.746