OLONG_006294 (Oryza longistaminata)
C2H2 ZF,MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF01429 (MBD)
IPR007087
IPR001739
OLONG_006294 T076640_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_006294-R1 MBD 110 172
OLONG_006294-R1 C2H2 ZF 229 252
OLONG_006294-R1 C2H2 ZF 278 300
OLONG_006294-R2 MBD 110 172
OLONG_006294-R2 C2H2 ZF 229 252
OLONG_006294-R2 C2H2 ZF 278 300
OLONG_006294-R3 MBD 110 172
OLONG_006294-R3 C2H2 ZF 229 252
OLONG_006294-R3 C2H2 ZF 278 300
OLONG_006294-R4 MBD 110 172
OLONG_006294-R4 C2H2 ZF 229 252
OLONG_006294-R4 C2H2 ZF 278 300
OLONG_006294-R5 MBD 34 96
OLONG_006294-R5 C2H2 ZF 153 176
OLONG_006294-R5 C2H2 ZF 202 224

Links

Other C2H2 ZF,MBD family TFs
Other Oryza longistaminata TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA028878 Oryza indica BGIOSGA028878 N 0.991
ONIVA08G20630 Oryza nivara ONIVA08G20630 N 0.991
OS08G0485700 Oryza sativa OS08G0485700 N 0.991
OBART08G18610 Oryza barthii OBART08G18610 N 0.972
OS08G0485600 Oryza sativa OS08G0485600 N 0.972
BGIOSGA028876 Oryza indica BGIOSGA028876 N 0.972
OGLUM08G19590 Oryza glumaepatula OGLUM08G19590 N 0.972
OGLUM08G19580 Oryza glumaepatula OGLUM08G19580 N 0.955
OPUNC08G16580 Oryza punctata OPUNC08G16580 N 0.936
OB08G25720 Oryza brachyantha OB08G25720 N 0.737