CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_006294
(
Oryza longistaminata
)
C2H2 ZF,MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF01429 (MBD)
IPR007087
IPR001739
OLONG_006294
T076640_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_006294-R1
MBD
110
172
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
OLONG_006294-R1
C2H2 ZF
229
252
YECQQCNSTFHGQSAYAHHLITFH
OLONG_006294-R1
C2H2 ZF
278
300
FECPVCNKTFEEQSRYFGHVGSH
OLONG_006294-R2
MBD
110
172
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
OLONG_006294-R2
C2H2 ZF
229
252
YECQQCNSTFHGQSAYAHHLITFH
OLONG_006294-R2
C2H2 ZF
278
300
FECPVCNKTFEEQSRYFGHVGSH
OLONG_006294-R3
MBD
110
172
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
OLONG_006294-R3
C2H2 ZF
229
252
YECQQCNSTFHGQSAYAHHLITFH
OLONG_006294-R3
C2H2 ZF
278
300
FECPVCNKTFEEQSRYFGHVGSH
OLONG_006294-R4
MBD
110
172
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
OLONG_006294-R4
C2H2 ZF
229
252
YECQQCNSTFHGQSAYAHHLITFH
OLONG_006294-R4
C2H2 ZF
278
300
FECPVCNKTFEEQSRYFGHVGSH
OLONG_006294-R5
MBD
34
96
GDHLPSGWRLQLGIKRKDRKAWVNCFSYVSPKGQSFATCQEVSAYLMSLLGYPEFKTDNIEYG
OLONG_006294-R5
C2H2 ZF
153
176
YECQQCNSTFHGQSAYAHHLITFH
OLONG_006294-R5
C2H2 ZF
202
224
FECPVCNKTFEEQSRYFGHVGSH
Links
Other
C2H2 ZF,MBD
family TFs
Other
Oryza longistaminata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy