Zscan20 (Mus musculus)
C2H2 ZF,Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00249 (Myb_DNA-binding) 		IPR007087
IPR014778 		ENSMUSG00000061894 T076679_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in several structures, including cerebral cortex; early conceptus; ganglia; genitourinary system; and lung. Orthologous to human ZSCAN20 (zinc finger and SCAN domain containing 20). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zscan20
M00764_2.00		 Mus musculus
NNNNNNNN
NNNNNNNN		 PBM
Weirauch et al.(2013)
pTH3997		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00764_2.00 Myb 19 78
M00764_2.00 C2H2 ZF 266 288
M00764_2.00 C2H2 ZF 294 316
M00764_2.00 C2H2 ZF 322 344
M00764_2.00 C2H2 ZF 403 425
M00764_2.00 C2H2 ZF 431 453
M00764_2.00 C2H2 ZF 459 481
M00764_2.00 C2H2 ZF 487 509
M00764_2.00 C2H2 ZF 515 537
M00764_2.00 C2H2 ZF 543 565

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000095487 Myb 478 537
ENSMUSP00000095487 C2H2 ZF 725 747
ENSMUSP00000095487 C2H2 ZF 753 775
ENSMUSP00000095487 C2H2 ZF 781 803
ENSMUSP00000095487 C2H2 ZF 862 884
ENSMUSP00000095487 C2H2 ZF 890 912
ENSMUSP00000095487 C2H2 ZF 918 940
ENSMUSP00000095487 C2H2 ZF 946 968
ENSMUSP00000095487 C2H2 ZF 974 996
ENSMUSP00000095487 C2H2 ZF 1002 1024

Links

Other C2H2 ZF,Myb/SANT family TFs
Other Mus musculus TFs

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4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action