CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN20
(
Oryctolagus cuniculus
)
C2H2 ZF,Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00249 (Myb_DNA-binding)
IPR007087
IPR014778
ENSOCUG00000007192
T076683_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zscan20
M00764_2.00
Mus musculus
NNNNNNNN
NNNNNNNN
PBM
Weirauch et al.(2013)
pTH3997
0.709
0.709
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000006212
Myb
327
387
VHWGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAIAERLRARGFLRTLEQCRYRVKNLL
ENSOCUP00000006212
Myb
487
547
VHWGYEETKTFLAILSESPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRFKNLL
ENSOCUP00000006212
C2H2 ZF
703
725
YKCNSCVRSFSQSSPFLAHQQKH
ENSOCUP00000006212
C2H2 ZF
759
781
YRCLECEKSFSDHSSLIAHQKTH
ENSOCUP00000006212
C2H2 ZF
787
809
YKCGECWESFNKSSNLLKHQRIH
ENSOCUP00000006212
C2H2 ZF
868
890
YQCPECGRSFSKSSALISHQRIH
ENSOCUP00000006212
C2H2 ZF
896
918
FECGECGKSFSKSSTLANHQRTH
ENSOCUP00000006212
C2H2 ZF
924
946
HQCADCGKCFSERSKLITHQRVH
ENSOCUP00000006212
C2H2 ZF
952
974
YKCPECGKFFRDRSNLITHQRIH
ENSOCUP00000006212
C2H2 ZF
980
1002
YQCRECGKCFNQSSSLIIHQRIH
ENSOCUP00000006212
C2H2 ZF
1008
1030
YKCTECGKDFNNSSHFSAHRRTH
Links
Other
C2H2 ZF,Myb/SANT
family TFs
Other
Oryctolagus cuniculus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy