fgenesh2_pg.scaffold_151000079 (Branchiostoma floridae)
C2H2 ZF,Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2)
PF05225 (HTH_psq)
IPR007087
IPR007889
fgenesh2_pg.scaffold_151000079 T076756_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_151000079 Pipsqueak 1 39
fgenesh2_pg.scaffold_151000079 C2H2 ZF 432 454
fgenesh2_pg.scaffold_151000079 C2H2 ZF 462 484
fgenesh2_pg.scaffold_151000079 C2H2 ZF 518 540
fgenesh2_pg.scaffold_151000079 C2H2 ZF 546 568
fgenesh2_pg.scaffold_151000079 C2H2 ZF 573 595
fgenesh2_pg.scaffold_151000079 C2H2 ZF 601 623
fgenesh2_pg.scaffold_151000079 C2H2 ZF 631 653
fgenesh2_pg.scaffold_151000079 C2H2 ZF 658 680
fgenesh2_pg.scaffold_151000079 C2H2 ZF 686 708
fgenesh2_pg.scaffold_151000079 C2H2 ZF 713 735
fgenesh2_pg.scaffold_151000079 C2H2 ZF 741 763
fgenesh2_pg.scaffold_151000079 C2H2 ZF 769 791
fgenesh2_pg.scaffold_151000079 C2H2 ZF 797 818
fgenesh2_pg.scaffold_151000079 C2H2 ZF 824 846

Links

Other C2H2 ZF,Pipsqueak family TFs
Other Branchiostoma floridae TFs

0 Related TFs

">No related TF found