CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold11-EXSNAP2012.20
(
Pristionchus exspectatus
)
C2H2 ZF,THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF05485 (THAP)
IPR007087
IPR006612
scaffold11-EXSNAP2012.20
T077154_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold11-EXSNAP2012.20
THAP finger
1
71
MHKFTIVEAKKRIWIDAVRSTPDRRRELTAQISASKSCPHLCSAHFAPSDYIRTPNAVILKPDAVPRFDDQ
scaffold11-EXSNAP2012.20
THAP finger
115
197
TCIVCGERRNRKEVHQFTVAQTKQPIWIDAVRSTPEGRRALAAVLNSSKRPHLCSAHFSPDDYIRTPTSVVLKPDAVPHYDDC
scaffold11-EXSNAP2012.20
C2H2 ZF
440
461
YSCNECGEEFEIFRDLAKHKRA
scaffold11-EXSNAP2012.20
C2H2 ZF
604
627
FKCDDCGYAFKASSILKEHQRKVH
scaffold11-EXSNAP2012.20
C2H2 ZF
812
835
FRCNVCGGSFVAASRLNQHLREDH
Links
Other
C2H2 ZF,THAP finger
family TFs
Other
Pristionchus exspectatus
TFs
0 Related TFs
">No related TF found