CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_00576
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_00576
T077263_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.825
0.978
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
0.795
0.902
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_00576T0
C2H2 ZF
119
141
FHCQTCSKGFARRSDLARHERIH
CIMG_00576T0
C2H2 ZF
147
171
HVCDWPGCGKQFIQRSALTVHTRVH
CIMG_00576T0
C2H2 ZF
177
199
HMCDRCGKPFSDSSSLARHRRIH
CIMG_00576T0
C2H2 ZF
205
229
YKCPYANCQKTFTRRTTLTRHQNHH
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy