CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_02603
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_02603
T077274_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_09143
M01450_2.00
Histoplasma capsulatum
WWTTTTTT
AAAAAAWW
PBM
Najafabadi et al.(2015a)
pTH11151
0.795
0.902
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_02603T0
C2H2 ZF
212
236
YECNLPHCRKSFYQKTHLDIHMRAH
CIMG_02603T0
C2H2 ZF
242
266
FVCREPACGQRFSQLGNLKTHERRH
CIMG_02603T0
C2H2 ZF
272
294
YSCEICNKRFAQRGNVRAHKITH
CIMG_02603T0
C2H2 ZF
300
325
FICRLDDCGKQFTQLGNLKSHQNKFH
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy