CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_04796
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_04796
T077284_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.776
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_04796T0
C2H2 ZF
362
387
FKCEYPGCNSEPFQTQYLLNSHANVH
CIMG_04796T0
C2H2 ZF
393
422
YHCPVEDCPRGKGGTGFKRKNEMKRHALVH
CIMG_04796T0
C2H2 ZF
427
453
YICPFCSDQQRQYPRPDNLQRHVRAQH
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy