CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_10049
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_10049
T077298_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.792
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_10049T0
C2H2 ZF
271
293
YICRICHKAFSRPSSLRIHSHSH
CIMG_10049T0
C2H2 ZF
299
324
FRCPHAGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy