CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPAG_02889
(
Candida parapsilosis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CPAG_02889
T077347_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CRZ1
M00038_2.00
Saccharomyces cerevisiae
NNDCTRHGCCNN
NNGGCDYAGHNN
PBM
Badis et al.(2008)
CRZ1_4531
0.756
0.809
CRZ1
M07468_2.00
Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0285.1
0.756
0.809
CRZ1
M08541_2.00
Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN
Misc
DeBoer et al.(2011)
YNL027W_516
0.756
0.809
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPAG_02889.1
C2H2 ZF
554
576
YACHLCEKRFTRPYNLKSHLRTH
CPAG_02889.1
C2H2 ZF
582
604
FICSQCGKAFARQHDRKRHEDLH
CPAG_02889.1
C2H2 ZF
610
640
FQCKGMLKNGQPYGCGRKFARADALRRHFQT
Links
Other
C2H2 ZF
family TFs
Other
Candida parapsilosis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy