CpipJ_CPIJ000614 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ000614 T077375_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ci
M03672_2.00 		Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN		 SELEX
Nitta et al.(2015)
ci_1 		0.812 0.930
ci
M06084_2.00 		Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY		 B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859 		0.812 0.930
ci
M02644_2.00 		Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
Ci 		0.812 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ000614-RA C2H2 ZF 299 324
CpipJ_CPIJ000614-RA C2H2 ZF 332 359
CpipJ_CPIJ000614-RA C2H2 ZF 365 389
CpipJ_CPIJ000614-RA C2H2 ZF 395 420
CpipJ_CPIJ000614-RA C2H2 ZF 426 451

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action