CpipJ_CPIJ005455 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ005455 T077528_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.776 0.892
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.776 0.892
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.776 0.892
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ005455-RA C2H2 ZF 308 328
CpipJ_CPIJ005455-RA C2H2 ZF 338 359
CpipJ_CPIJ005455-RA C2H2 ZF 363 385
CpipJ_CPIJ005455-RA C2H2 ZF 391 413
CpipJ_CPIJ005455-RA C2H2 ZF 419 440

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPIJ005455 Culex quinquefasciatus CPIJ005455 I 0.827
AAEL003978 Aedes aegypti AAEL003978 I 0.814
AALB005349 Anopheles albimanus AALB005349 I 0.804
ADAC007927 Anopheles darlingi ADAC007927 I 0.804
L798_08219 Zootermopsis nevadensis L798_08219 I 0.793
AFUN000435 Anopheles funestus AFUN000435 I 0.786
ACUA018690 Anopheles culicifacies ACUA018690 I 0.786
AMAM014424 Anopheles maculatus AMAM014424 I 0.786
AMIN007420 Anopheles minimus AMIN007420 I 0.786
AFAF000519 Anopheles farauti AFAF000519 I 0.786
GK17557 Drosophila willistoni FBgn0219556 I 0.784
ACOM027947 Anopheles coluzzii ACOM027947 I 0.784
GA14370 Drosophila pseudoobscura FBgn0074398 I 0.784
AGAP005390 Anopheles gambiae AGAP005390 I 0.784
AMEC006310 Anopheles melas AMEC006310 I 0.784
AMEM010751 Anopheles merus AMEM010751 I 0.784
AQUA007695 Anopheles quadriannulatus AQUA007695 I 0.784
CapteG19364 Capitella teleta CapteG19364 I 0.783
LDEC013204 Leptinotarsa decemlineata LDEC013204 I 0.781
SINV14822 Solenopsis invicta SINV14822 I 0.781
ACEP27778 Atta cephalotes ACEP27778 I 0.781
GB42492 Apis mellifera GB42492 I 0.781
TC002803 Tribolium castaneum TC002803 I 0.779
LLOJ001905 Lutzomyia longipalpis LLOJ001905 I 0.778
GF25038 Drosophila ananassae FBgn0102030 I 0.778
GI16731 Drosophila mojavensis FBgn0139479 I 0.776
GM14272 Drosophila sechellia FBgn0169198 I 0.776
GH15211 Drosophila grimshawi FBgn0122686 I 0.776
GG14656 Drosophila erecta FBgn0106912 I 0.776
Kah Drosophila melanogaster FBgn0035144 D 0.776
MDOA000347 Musca domestica MDOA000347 I 0.776
GE21016 Drosophila yakuba FBgn0238298 I 0.776
GJ12475 Drosophila virilis FBgn0199717 I 0.776
PHUM530390 Pediculus humanus PHUM530390 I 0.776
e_gw.6.95.1 Branchiostoma floridae e_gw.6.95.1 I 0.776
LCUP006416 Lucilia cuprina LCUP006416 I 0.776
AATE004981 Anopheles atroparvus AATE004981 I 0.775
tetur14g01820 Tetranychus urticae tetur14g01820 I 0.773
YQE_07798 Dendroctonus ponderosae YQE_07798 I 0.772
NV16451 Nasonia vitripennis NV16451 I 0.769
CGI_10005451 Crassostrea gigas CGI_10005451 I 0.764
RPRC007744 Rhodnius prolixus RPRC007744 N 0.762
BGLB003738 Biomphalaria glabrata BGLB003738 I 0.762
SPU_015640 Strongylocentrotus purpuratus SPU_015640 I 0.762
DAPPUDRAFT_53927 Daphnia pulex DAPPUDRAFT_53927 I 0.762
Ocbimv22026834m.g Octopus bimaculoides Ocbimv22026834m.g I 0.762
HHAL003145-PA Halyomorpha halys HHAL003145-PA N 0.758