CpipJ_CPIJ007425 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ007425 T077583_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Blimp-1
M03692_2.00 		Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN		 SELEX
Nitta et al.(2015)
Blimp-1_1 		0.827 0.982
Blimp-1
M06141_2.00 		Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT		 B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625 		0.827 0.982
Blimp-1
M06142_2.00 		Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY		 B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625 		0.827 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ007425-RA C2H2 ZF 736 758
CpipJ_CPIJ007425-RA C2H2 ZF 764 786
CpipJ_CPIJ007425-RA C2H2 ZF 792 814
CpipJ_CPIJ007425-RA C2H2 ZF 820 842
CpipJ_CPIJ007425-RA C2H2 ZF 848 869

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

Invalid Input OrderBy

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action