CpipJ_CPIJ007837 (Culex pipiens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 CpipJ_CPIJ007837 T077588_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN

NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.762 0.841
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG

CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.762 0.841
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH

DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.762 0.841
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT

ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.762 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ007837-RA C2H2 ZF 234 256
CpipJ_CPIJ007837-RA C2H2 ZF 262 286
CpipJ_CPIJ007837-RA C2H2 ZF 292 318

Links

Other C2H2 ZF family TFs
Other Culex pipiens TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
e_gw.590.38.1 Branchiostoma floridae e_gw.590.38.1 N 0.000
gw.241.99.1 Branchiostoma floridae gw.241.99.1 N 0.000
Ocbimv22016417m.g Octopus bimaculoides Ocbimv22016417m.g N 0.000
Sakowv30007678m.g Saccoglossus kowalevskii Sakowv30007678m.g N 0.000