CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CpipJ_CPIJ016082
(
Culex pipiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CpipJ_CPIJ016082
T077926_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ken
M06111_2.00
Drosophila melanogaster
ACTTTCWCY
RGWGAAAGT
B1H
Zhu et al.(2011)
ken_SANGER_10_FBgn0011236
0.790
0.913
ken
M06112_2.00
Drosophila melanogaster
NNRCTTTCWCYNNNN
NNNNRGWGAAAGYNN
B1H
Zhu et al.(2011)
ken_SOLEXA_5_FBgn0011236
0.790
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ016082-RA
C2H2 ZF
555
577
YRCEYCGKTFGMSWNLKTHLRVH
CpipJ_CPIJ016082-RA
C2H2 ZF
583
606
FACRLCVAMFKQKAHLLKHLCSVH
CpipJ_CPIJ016082-RA
C2H2 ZF
619
642
YTCCFCSLVFETLQELVRHLSGHH
Links
Other
C2H2 ZF
family TFs
Other
Culex pipiens
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy