CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RO3G_06264
(
Rhizopus oryzae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RO3G_06264
T078178_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03043
M01193_2.00
Neurospora crassa
NNNNNATCNN
NNGATNNNNN
PBM
Lambert et al.(2019)
pTH8622
0.759
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_06263
C2H2 ZF
231
253
YKCSVCPKRFTRPSSLATHMHSH
RO3T_06263
C2H2 ZF
259
283
YECEHEGCGRRFSVVSNLRRHAKIH
Links
Other
C2H2 ZF
family TFs
Other
Rhizopus oryzae
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy