RO3G_07016 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_07016 T078186_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_07016
M01436_2.00		 Rhizopus oryzae
NNCYCCYNN
NNRGGRGNN		 PBM
Najafabadi et al.(2015a)
pTH10224		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01436_2.00 C2H2 ZF 51 76
M01436_2.00 C2H2 ZF 82 106

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_07015 C2H2 ZF 138 163
RO3T_07015 C2H2 ZF 169 193

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RO3G_05225 Rhizopus oryzae RO3G_05225 I 0.797
NDAI_0G03420 Naumovozyma dairenensis NDAI_0G03420 I 0.770
GNLVRS01_PISO0L16555g Millerozyma farinosa GNLVRS01_PISO0L16555g I 0.766
GNLVRS01_PISO0K16554g Millerozyma farinosa GNLVRS01_PISO0K16554g I 0.766
estExt_fgenesh1_pg.C_chr_7.10133 Pichia stipitis estExt_fgenesh1_pg.C_chr_7.10133 I 0.760
PICST_68294 Scheffersomyces stipitis PICST_68294 I 0.760
DEHA2E03828g Debaryomyces hansenii DEHA2E03828g I 0.760
G210_4804 Candida maltosa G210_4804 I 0.760