RO3G_11643 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_11643 T078206_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RO3G_11643
M01438_2.00
Rhizopus oryzae
NNNMGCCHCN

NGDGGCKNNN
PBM
Najafabadi et al.(2015a)
pTH10227
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01438_2.00 C2H2 ZF 51 75
M01438_2.00 C2H2 ZF 81 103
M01438_2.00 C2H2 ZF 109 130

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_11642 C2H2 ZF 214 238
RO3T_11642 C2H2 ZF 244 266
RO3T_11642 C2H2 ZF 272 293

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw1.5.909.1 Mucor circinelloides gw1.5.909.1 I 0.817
gw1.2.1092.1 Mucor circinelloides gw1.2.1092.1 I 0.786
RO3G_08573 Rhizopus oryzae RO3G_08573 I 0.780
RO3G_08568 Rhizopus oryzae RO3G_08568 I 0.780
RO3G_11824 Rhizopus oryzae RO3G_11824 I 0.776