RO3G_13834 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_13834 T078217_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00 		Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221 		0.792 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_13833 C2H2 ZF 174 196
RO3T_13833 C2H2 ZF 202 226

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.15.181.1 Phycomyces blakesleeanus gw1.15.181.1 I 0.798
estExt_Genewise1.C_80340 Mucor circinelloides estExt_Genewise1.C_80340 I 0.798
RO3G_05801 Rhizopus oryzae RO3G_05801 D 0.792
gw1.1.1257.1 Mucor circinelloides gw1.1.1257.1 I 0.787
gw1.23.155.1 Phycomyces blakesleeanus gw1.23.155.1 I 0.773
GLOINDRAFT_58638 Rhizophagus irregularis GLOINDRAFT_58638 I 0.769
GLOINDRAFT_221110 Rhizophagus irregularis GLOINDRAFT_221110 I 0.769
GLOINDRAFT_24118 Rhizophagus irregularis GLOINDRAFT_24118 I 0.769
estExt_fgeneshMC_pg.C_10568 Mucor circinelloides estExt_fgeneshMC_pg.C_10568 I 0.769
gw1.3.584.1 Phycomyces blakesleeanus gw1.3.584.1 I 0.763
RO3G_01826 Rhizopus oryzae RO3G_01826 I 0.763
gw1.73.24.1 Phycomyces blakesleeanus gw1.73.24.1 I 0.757
gw1.25.121.1 Phycomyces blakesleeanus gw1.25.121.1 I 0.757