CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNOG_06177
(
Stagonospora nodorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SNOG_06177
T078249_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
0.804
0.930
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.789
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_06177
C2H2 ZF
150
172
FACSTCGKGFARRSDLARHERIH
SNOT_06177
C2H2 ZF
178
202
HVCDYPNCGKQFIQRSALTVHQRVH
SNOT_06177
C2H2 ZF
230
246
TQPFSDSSSLARHRRIH
SNOT_06177
C2H2 ZF
252
276
YKCPYADCQKTFTRRTTLTRHQNHH
Links
Other
C2H2 ZF
family TFs
Other
Stagonospora nodorum
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy