CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SNOG_09345
(
Stagonospora nodorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SNOG_09345
T078263_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_09143
M01450_2.00
Histoplasma capsulatum
WWTTTTTT
AAAAAAWW
PBM
Najafabadi et al.(2015a)
pTH11151
0.777
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNOT_09345
C2H2 ZF
220
244
YQCHMPDCNKSFFQKTHLEIHIRAH
SNOT_09345
C2H2 ZF
250
274
FECKAPGCGQRFSQLGNLKTHERRH
SNOT_09345
C2H2 ZF
280
302
YSCDICGKTFAQRGNVRAHKIVH
SNOT_09345
C2H2 ZF
308
333
FTCRLDDCGKQFTQLGNLKSHQNKFH
Links
Other
C2H2 ZF
family TFs
Other
Stagonospora nodorum
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy