VDBG_03423 (Verticillium albo atrum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 VDBG_03423 T078386_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU01629
M01191_2.00
Neurospora crassa
TRYGSCRC

GYGSCRYA
PBM
Lambert et al.(2019)
pTH9692
0.823 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_03423T0 C2H2 ZF 278 302
VDBG_03423T0 C2H2 ZF 310 335
VDBG_03423T0 C2H2 ZF 341 362

Links

Other C2H2 ZF family TFs
Other Verticillium albo atrum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACRE_023020 Acremonium chrysogenum ACRE_023020 I 0.773
Bcin13g04290 Botrytis cinerea Bcin13g04290 I 0.816
CFIO01_13709 Colletotrichum fioriniae CFIO01_13709 I 0.791
CGGC5_5349 Colletotrichum gloeosporioides CGGC5_5349 I 0.824
CH063_01157 Colletotrichum higginsianum CH063_01157 I 0.798
CHGG_10292 Chaetomium globosum CHGG_10292 I 0.823
CSUB01_04852 Colletotrichum sublineola CSUB01_04852 I 0.775
estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 Nectria haematococca estExt_fgenesh1_pg.C_sca_11_chr8_3_00008 I 0.773
estExt_fgenesh3_kg.C_100506 Neurospora discreta estExt_fgenesh3_kg.C_100506 I 0.823
e_gw1.2.1598.1 Cryphonectria parasitica e_gw1.2.1598.1 I 0.765
F503_00525 Ophiostoma piceae uamh F503_00525 I 0.820
FFUJ_09752 Fusarium fujikuroi FFUJ_09752 I 0.773
FGRRES_04293 Fusarium graminearum FGRRES_04293 I 0.773
FOXG_13949 Fusarium oxysporum FOXG_13949 I 0.773
FPSE_04814 Fusarium pseudograminearum FPSE_04814 I 0.773
FVEG_11371 Fusarium verticillioides FVEG_11371 I 0.760
GGTG_10358 Gaeumannomyces graminis GGTG_10358 I 0.816
GLRG_08739 Colletotrichum graminicola GLRG_08739 I 0.782
HMPREF1624_08709 Sporothrix schenckii HMPREF1624_08709 I 0.795
MAPG_02519 Magnaporthe poae MAPG_02519 I 0.816
MBM_09584 Marssonina brunnea MBM_09584 I 0.812
MGG_03133 Magnaporthe oryzae MGG_03133 I 0.807
MYCTH_2312442 Myceliophthora thermophila MYCTH_2312442 I 0.820
NCU01629 Neurospora crassa NCU01629 D 0.823
NechaG101360 Fusarium solani NechaG101360 I 0.773
NEUTE1DRAFT_130390 Neurospora tetrasperma NEUTE1DRAFT_130390 I 0.823
OIDMADRAFT_123149 Oidiodendron maius OIDMADRAFT_123149 I 0.804
PFICI_04978 Pestalotiopsis fici PFICI_04978 I 0.772
PFICI_07315 Pestalotiopsis fici PFICI_07315 I 0.794
PODANS_6_5390 Podospora anserina PODANS_6_5390 I 0.811
S40285_07199 Stachybotrys chlorohalonata S40285_07199 I 0.777
S40288_06328 Stachybotrys chartarum S40288_06328 I 0.777
SBOR_4904 Sclerotinia borealis SBOR_4904 I 0.816
SMAC_02359 Sordaria macrospora SMAC_02359 I 0.823
SS1G_09588 Sclerotinia sclerotiorum SS1G_09588 I 0.816
THITE_2124193 Thielavia terrestris THITE_2124193 I 0.823
VDAG_10032 Verticillium dahliae VDAG_10032 I 0.827
VDBG_03423 Verticillium alfalfae VDBG_03423 I 0.827