VDBG_04504 (Verticillium albo atrum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 VDBG_04504 T078390_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU02666
M01875_2.00
Neurospora crassa
NNNMGCCACN

NGTGGCKNNN
PBM
Weirauch et al.(2014)
pTH8838
0.803 0.882
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_04504T0 C2H2 ZF 261 283
VDBG_04504T0 C2H2 ZF 289 311
VDBG_04504T0 C2H2 ZF 317 338

Links

Other C2H2 ZF family TFs
Other Verticillium albo atrum TFs

Invalid Input OrderBy

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action