VDBG_05992 (Verticillium albo atrum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 VDBG_05992 T078395_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU09333
M01892_2.00
Neurospora crassa
NNNNGCCTDN

NHAGGCNNNN
PBM
Weirauch et al.(2014)
pTH8940
0.779 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_05992T0 C2H2 ZF 426 450

Links

Other C2H2 ZF family TFs
Other Verticillium albo atrum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g05112 Acanthocheilonema viteae nAv.1.0.1.g05112 N 0.000
ASU_06962 Ascaris suum ASU_06962 N 0.000
Bm7459 Brugia malayi Bm7459 N 0.000
BTMF_0000953701 Brugia timori BTMF_0000953701 N 0.000
BXY_1512700 Bursaphelenchus xylophilus BXY_1512700 N 0.000
CBG06922 Caenorhabditis briggsae CBG06922 N 0.000
sma-2 Caenorhabditis elegans WBGene00004856 N 0.000
CRE15772 Caenorhabditis remanei CRE15772 N 0.000
DME_0000390001 Dracunculus medinensis DME_0000390001 N 0.000
EEL_0000068901 Elaeophora elaphi EEL_0000068901 N 0.000
EVEC_0000636701 Enterobius vermicularis EVEC_0000636701 N 0.000
HCOI01543700 Haemonchus contortus HCOI01543700 N 0.000
HCOI00251100 Haemonchus contortus HCOI00251100 N 0.000
nLs.2.1.2.g02003 Litomosoides sigmodontis nLs.2.1.2.g02003 N 0.000
LOAG_01471 Loa loa LOAG_01471 N 0.000
maker-nMf.1.1.scaf00076-augustus-gene-0.21 Meloidogyne floridensis maker-nMf.1.1.scaf00076-augustus-gene-0.21 N 0.000
Minc06478 Meloidogyne incognita Minc06478 N 0.000
NBR_0000271401 Nippostrongylus brasiliensis NBR_0000271401 N 0.000
NBR_0000522801 Nippostrongylus brasiliensis NBR_0000522801 I 0.000
OFLC_0000052301 Onchocerca flexuosa OFLC_0000052301 N 0.000
nOo.2.0.1.g00974 Onchocerca ochengi nOo.2.0.1.g00974 N 0.000
WBGene00245189 Onchocerca volvulus WBGene00245189 N 0.000
PTRK_0000297300 Parastrongyloides trichosuri PTRK_0000297300 N 0.000
RSKR_0000082500 Rhabditophanes kr3021 RSKR_0000082500 N 0.000
L893_g15060 Steinernema glaseri L893_g15060 N 0.000
L898_g14583 Steinernema monticolum L898_g14583 N 0.000
L892_g4529 Steinernema scapterisci L892_g4529 N 0.000
SPAL_0001290200 Strongyloides papillosus SPAL_0001290200 N 0.000
SSTP_0000571600 Strongyloides stercoralis SSTP_0000571600 N 0.000
SVE_0161800 Strongyloides venezuelensis SVE_0161800 N 0.000
SMUV_0000477801 Syphacia muris SMUV_0000477801 N 0.000
TCLT_0000791701 Thelazia callipaeda TCLT_0000791701 N 0.000
WUBG_02400 Wuchereria bancrofti WUBG_02400 N 0.000