CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_08790
(
Verticillium albo atrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
VDBG_08790
T078406_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_08790T0
C2H2 ZF
49
73
YVCTTEDCGKSFLTATRLRRHQEVH
VDBG_08790T0
C2H2 ZF
79
105
FRCRDYPPCDQSFRKHNTLQRHIRAEH
VDBG_08790T0
C2H2 ZF
111
136
YLCPEQGCHAGFDSQGALRNHTKRDH
VDBG_08790T0
C2H2 ZF
186
211
IPCAWPGCDKKFTKKSNLNAHVRSAH
VDBG_08790T0
C2H2 ZF
235
256
EQGCGTAFVTKGNLEAHIRHVH
Links
Other
C2H2 ZF
family TFs
Other
Verticillium albo atrum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_08790
Verticillium alfalfae
VDBG_08790
N
0.827