CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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WUBG_04696
(
Wuchereria bancrofti
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
WUBG_04696
T078432_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Blimp-1
M03692_2.00
Drosophila melanogaster
NNYACTTTCVYYN
NRRBGAAAGTRNN
SELEX
Nitta et al.(2015)
Blimp-1_1
0.762
0.825
Blimp-1
M06141_2.00
Drosophila melanogaster
ACTTTCACTTTY
RAAAGTGAAAGT
B1H
Zhu et al.(2011)
Blimp-1_NAR_FBgn0035625
0.762
0.825
Blimp-1
M06142_2.00
Drosophila melanogaster
RCTTTCMCTTTY
RAAAGKGAAAGY
B1H
Zhu et al.(2011)
Blimp-1_SANGER_5_FBgn0035625
0.762
0.825
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
WUBG_04696T0
C2H2 ZF
602
624
YECKECSKTFGQLSNLKVHLRTH
WUBG_04696T0
C2H2 ZF
630
652
FKCSICFKEFTQLAHLQKHHLVH
WUBG_04696T0
C2H2 ZF
658
680
HQCEVCQKRFSSMSNLKTHLRLH
WUBG_04696T0
C2H2 ZF
686
708
YPCDLCSAKFTQFVHLKLHKRLH
WUBG_04696T0
C2H2 ZF
714
735
YNCSCCGKKYISPSGLRTHWKS
Links
Other
C2H2 ZF
family TFs
Other
Wuchereria bancrofti
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy