CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACYPI001198
(
Acyrthosiphon pisum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ACYPI001198
T079627_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Kah
M03690_2.00
Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN
SELEX
Nitta et al.(2015)
CG17181_1
0.759
0.804
Kah
M06137_2.00
Drosophila melanogaster
VCCACCTGT
ACAGGTGGB
B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144
0.759
0.804
Kah
M06138_2.00
Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN
B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144
0.759
0.804
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACYPI001198-PA
C2H2 ZF
93
114
QCPDCGKCYSTSSNLARHRQTH
ACYPI001198-PA
C2H2 ZF
124
145
HCPHCDKVYVSIPAFSMHMRTH
ACYPI001198-PA
C2H2 ZF
149
171
CKCGICGKCFSRPWLLQGHIRTH
ACYPI001198-PA
C2H2 ZF
177
199
YECEKCRKAFADKSNLRAHLQTH
ACYPI001198-PA
C2H2 ZF
205
226
HVCQKCNKAFALKSYLYKHEES
Links
Other
C2H2 ZF
family TFs
Other
Acyrthosiphon pisum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy