CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACYPI004681
(
Acyrthosiphon pisum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ACYPI004681
T079683_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.786
0.877
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.786
0.877
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.782
0.870
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.782
0.870
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.782
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACYPI004681-PA
C2H2 ZF
207
229
FTCNHCGKVFYAHYNLTRHMPVH
ACYPI004681-PA
C2H2 ZF
235
257
FICKVCGKGFRQASTLCRHKIIH
ACYPI004681-PA
C2H2 ZF
263
285
HTCAICGKAFNRSSTLNTHTRIH
ACYPI004681-PA
C2H2 ZF
291
313
YTCEYCGKGFHQKGNYKNHKLTH
ACYPI004681-PA
C2H2 ZF
319
341
YKCTVCHKAFHQVYNLTFHMHTH
ACYPI004681-PA
C2H2 ZF
347
370
FTCHVCGKGFCRNFDLKKHLRKLH
Links
Other
C2H2 ZF
family TFs
Other
Acyrthosiphon pisum
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy