ACYPI007319 (Acyrthosiphon pisum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACYPI007319 T079726_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC

GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.763 0.858
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC

GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.763 0.858
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI007319-PA C2H2 ZF 565 586
ACYPI007319-PA C2H2 ZF 592 614
ACYPI007319-PA C2H2 ZF 970 992
ACYPI007319-PA C2H2 ZF 998 1020
ACYPI007319-PA C2H2 ZF 1028 1049

Links

Other C2H2 ZF family TFs
Other Acyrthosiphon pisum TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L798_02171 Zootermopsis nevadensis L798_02171 I 0.797
PHUM606430 Pediculus humanus PHUM606430 I 0.797
RPRC001562 Rhodnius prolixus RPRC001562 I 0.796
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.786
SMAR003355 Strigamia maritima SMAR003355 I 0.783
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.779
ISCW016418 Ixodes scapularis ISCW016418 I 0.776
LotgiG139415 Lottia gigantea LotgiG139415 I 0.765
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.763
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.763
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.763
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.763
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.763
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.763
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.763
BCL11B Sus scrofa ENSSSCG00000002507 I 0.763
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.763
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.763
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.763
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.763
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.763
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.763
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.763
Aan_R000616 Calypte anna Aan_R000616 I 0.763
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.763
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.763
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.763
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.763
BCL11B Homo sapiens ENSG00000127152 D 0.763
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.763
BCL11B Canis familiaris ENSCAFG00000017809 I 0.763
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.763
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.763
BCL11B Bos taurus ENSBTAG00000018019 I 0.763
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.763
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.763
Bcl11b Mus musculus ENSMUSG00000048251 I 0.763
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.763
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.763
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.763
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.763
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.763
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.763
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.763
im:7142702 Danio rerio ENSDARG00000067727 I 0.761
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.761
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.761
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.761
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.761
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.761
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.760
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.759
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.758
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.758
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.757