CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACYPI007319
(
Acyrthosiphon pisum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ACYPI007319
T079726_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.763
0.858
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.763
0.858
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACYPI007319-PA
C2H2 ZF
565
586
ECEYCGKKFRFLSNLIVHRRTH
ACYPI007319-PA
C2H2 ZF
592
614
YKCSVCDHACTQSSKLKRHMKTH
ACYPI007319-PA
C2H2 ZF
970
992
DTCEYCGKVFKNCSNLTVHRRSH
ACYPI007319-PA
C2H2 ZF
998
1020
YKCELCSYACAQSSKLTRHMKTH
ACYPI007319-PA
C2H2 ZF
1028
1049
YRCRFCEMPFSVPSTLEKHMRK
Links
Other
C2H2 ZF
family TFs
Other
Acyrthosiphon pisum
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy