ACYPI007319 (Acyrthosiphon pisum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ACYPI007319 T079726_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI because the model on which it was based was not predicted in a later annotation.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.763 0.858
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.763 0.858
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI007319-PA C2H2 ZF 565 586
ACYPI007319-PA C2H2 ZF 592 614
ACYPI007319-PA C2H2 ZF 970 992
ACYPI007319-PA C2H2 ZF 998 1020
ACYPI007319-PA C2H2 ZF 1028 1049

Links

Other C2H2 ZF family TFs
Other Acyrthosiphon pisum TFs

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55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action