CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGAP002083
(
Anopheles gambiae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AGAP002083
T080359_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
rn
M03712_2.00
Drosophila melanogaster
BTTTTTWHV
BDWAAAAAV
SELEX
Nitta et al.(2015)
rn_1
0.782
0.942
rn
M06180_2.00
Drosophila melanogaster
GBNHTBDSNNBNTTTTTTTKSDHHB
VDDHSMAAAAAAANVNNSHVADNVC
B1H
Zhu et al.(2011)
rn_SANGER_10_FBgn0259172
0.782
0.942
rn
M06181_2.00
Drosophila melanogaster
NNNNBNNNNNNNDTTTTTTVNNNNB
VNNNNBAAAAAAHNNNNNNNVNNNN
B1H
Zhu et al.(2011)
rn_SOLEXA_5_FBgn0259172
0.782
0.942
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP002083-PA
C2H2 ZF
524
546
YQCKMCPQIFTSKADLQLHTQIH
AGAP002083-PA
C2H2 ZF
553
575
YKCSQCNKAFANSSYLSQHTRIH
AGAP002083-PA
C2H2 ZF
581
603
YRCEICQRKFTQLSHLQQHIRTH
AGAP002083-PA
C2H2 ZF
609
633
YKCRHSGCLKAFSQLSNLQSHSRCH
AGAP002083-PA
C2H2 ZF
639
661
YKCNSCYKCFADEPALLEHIPKH
AGAP002083-PA
C2H2 ZF
670
692
HICQYCGKSYTQETYLSKHMQKH
AGAP002083-PB
C2H2 ZF
325
347
YKCSQCNKAFANSSYLSQHTRIH
AGAP002083-PB
C2H2 ZF
353
375
YRCEICQRKFTQLSHLQQHIRTH
AGAP002083-PB
C2H2 ZF
381
405
YKCRHSGCLKAFSQLSNLQSHSRCH
AGAP002083-PB
C2H2 ZF
411
433
YKCNSCYKCFADEPALLEHIPKH
AGAP002083-PB
C2H2 ZF
442
464
HICQYCGKSYTQETYLSKHMQKH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles gambiae
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy