CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00012p00258620
(
Amborella trichopoda
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AMTR_s00012p00258620
T080669_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN08020
C2H2 ZF
34
56
YECTFCKRGFSTAQALGGHMNIH
Links
Other
C2H2 ZF
family TFs
Other
Amborella trichopoda
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_06s0004g05260
Vitis vinifera
VIT_06s0004g05260
N
0.827
AMTR_s00009p00194700
Amborella trichopoda
AMTR_s00009p00194700
N
0.827
PRUPE_ppa016491mg
Prunus persica
PRUPE_ppa016491mg
N
0.824
scaffold_800693.1
Arabidopsis lyrata
scaffold_800693.1
N
0.824
OS07G0417400
Oryza sativa
OS07G0417400
N
0.824
PRUPE_ppa021945mg
Prunus persica
PRUPE_ppa021945mg
N
0.824
ORGLA07G0099100
Oryza glaberrima
ORGLA07G0099100
N
0.824
OLONG_012182
Oryza longistaminata
OLONG_012182
N
0.824
ONIVA07G09630
Oryza nivara
ONIVA07G09630
N
0.824
ONIVA07G09640
Oryza nivara
ONIVA07G09640
N
0.824
OPUNC07G10480
Oryza punctata
OPUNC07G10480
N
0.824
ORUFI07G11810
Oryza rufipogon
ORUFI07G11810
N
0.824
Cla021877
Citrullus lanatus
Cla021877
N
0.824
gene30215-v1.0-hybrid
Fragaria vesca
gene30215-v1.0-hybrid
N
0.824
evm.TU.supercontig_44.98
Carica papaya
evm.TU.supercontig_44.98
N
0.824
Gorai.011G172000
Gossypium raimondii
Gorai.011G172000
N
0.824
MDP0000143134
Malus domestica
MDP0000143134
N
0.824
orange1.1g037433m.g
Citrus sinensis
orange1.1g037433m.g
N
0.824
Eucgr.H00184
Eucalyptus grandis
Eucgr.H00184
N
0.824
Ciclev10006751m.g
Citrus clementina
Ciclev10006751m.g
N
0.824
Pm009419
Prunus mume
Pm009419
N
0.824
Bostr.3148s0115
Boechera stricta
Bostr.3148s0115
N
0.824
Cagra.19122s0001
Capsella grandiflora
Cagra.19122s0001
N
0.824
Carubv10028256m.g
Capsella rubella
Carubv10028256m.g
N
0.824
OGLUM07G11160
Oryza glumaepatula
OGLUM07G11160
N
0.824
TCM_020819
Theobroma cacao
TCM_020819
N
0.824
Bo7g065530
Brassica oleracea
Bo7g065530
N
0.824
GSMUA_Achr8G14360_001
Musa acuminata
GSMUA_Achr8G14360_001
N
0.824
BGIOSGA025569
Oryza indica
BGIOSGA025569
N
0.824
OBART07G11660
Oryza barthii
OBART07G11660
N
0.824
Bo9g059250
Brassica oleracea
Bo9g059250
N
0.824
GLYMA20G34840
Glycine max
GLYMA20G34840
N
0.824
Bra033683
Brassica rapa
Bra033683
N
0.824
GLYMA10G32810
Glycine max
GLYMA10G32810
N
0.824
Bra027500
Brassica rapa
Bra027500
N
0.824
OB07G18110
Oryza brachyantha
OB07G18110
N
0.824
LPERR07G09750
Leersia perrieri
LPERR07G09750
N
0.824
MTR_1g075430
Medicago truncatula
MTR_1g075430
N
0.824
PDK_20s1360411g002
Phoenix dactylifera
PDK_20s1360411g002
N
0.817
orange1.1g044013m.g
Citrus sinensis
orange1.1g044013m.g
N
0.817
Cla006093
Citrullus lanatus
Cla006093
N
0.817
MTR_1g070250
Medicago truncatula
MTR_1g070250
N
0.817
Cucsa.016990
Cucumis sativus
Cucsa.016990
N
0.817
PK22236.1
Cannabis sativa
PK22236.1
N
0.817
Ciclev10022375m.g
Citrus clementina
Ciclev10022375m.g
N
0.817
BRADI1G52490
Brachypodium distachyon
BRADI1G52490
I
0.814
GLYMA12G06340
Glycine max
GLYMA12G06340
N
0.814
Lus10022204.g
Linum usitatissimum
Lus10022204.g
I
0.814
Lus10021213.g
Linum usitatissimum
Lus10021213.g
I
0.814
Pavir.Ba02387
Panicum virgatum
Pavir.Ba02387
I
0.814
cassava32634.m1
Manihot esculenta
cassava32634.m1
N
0.814
Cucsa.117650
Cucumis sativus
Cucsa.117650
N
0.814
TRIUR3_25222
Triticum urartu
TRIUR3_25222
I
0.814
Cla008348
Citrullus lanatus
Cla008348
N
0.814
SapurV1A.0292s0190
Salix purpurea
SapurV1A.0292s0190
I
0.814
GRMZM2G443109
Zea mays
GRMZM2G443109
I
0.814
Sb02g009930
Sorghum bicolor
Sb02g009930
I
0.814
MTR_4g064873
Medicago truncatula
MTR_4g064873
N
0.814
GRMZM2G409452
Zea mays
GRMZM2G409452
I
0.814
Si032478m.g
Setaria italica
Si032478m.g
I
0.814
SapurV1A.0007s0800
Salix purpurea
SapurV1A.0007s0800
I
0.814
Pavir.Bb00955
Panicum virgatum
Pavir.Bb00955
I
0.814
Traes_2BS_0544D9D4B
Triticum aestivum
Traes_2BS_0544D9D4B
I
0.814
Traes_2DS_035AA95E3
Triticum aestivum
Traes_2DS_035AA95E3
I
0.814
Traes_2AS_099955797
Triticum aestivum
Traes_2AS_099955797
I
0.814
GSMUA_Achr11G02150_001
Musa acuminata
GSMUA_Achr11G02150_001
N
0.805
F775_00917
Aegilops tauschii
F775_00917
I
0.794
MTR_7g063220
Medicago truncatula
MTR_7g063220
I
0.776
Pm002649
Prunus mume
Pm002649
N
0.776
chr1.CM0147.870.nc
Lotus japonicus
chr1.CM0147.870.nc
I
0.776
mgf024356m
Mimulus guttatus
mgf024356m
I
0.766
PRUPE_ppb012667mg
Prunus persica
PRUPE_ppb012667mg
N
0.766
GLYMA07G16290
Glycine max
GLYMA07G16290
I
0.766
POPTR_0016s10480
Populus trichocarpa
POPTR_0016s10480
I
0.766
28345.m000111
Ricinus communis
28345.m000111
N
0.764
cassava4410.m1
Manihot esculenta
cassava4410.m1
N
0.764
Gorai.002G256500
Gossypium raimondii
Gorai.002G256500
N
0.764
TCM_021876
Theobroma cacao
TCM_021876
N
0.764
Aquca_003_00162
Aquilegia coerulea
Aquca_003_00162
N
0.764
Si019563m.g
Setaria italica
Si019563m.g
I
0.760
Sb04g037590
Sorghum bicolor
Sb04g037590
I
0.760
OB02G44430
Oryza brachyantha
OB02G44430
I
0.760
GRMZM2G344974
Zea mays
GRMZM2G344974
I
0.760
Pavir.Ab03315
Panicum virgatum
Pavir.Ab03315
I
0.760
Lus10022206.g
Linum usitatissimum
Lus10022206.g
I
0.757
POPTR_0008s16390
Populus trichocarpa
POPTR_0008s16390
I
0.757
Cucsa.321760
Cucumis sativus
Cucsa.321760
I
0.757
GRMZM2G000126
Zea mays
GRMZM2G000126
I
0.757
Cla008944
Citrullus lanatus
Cla008944
I
0.757