AMTR_s00140p00061590 (Amborella trichopoda)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AMTR_s00140p00061590 T080697_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN04778 C2H2 ZF 361 383
ERN04778 C2H2 ZF 384 409

Links

Other C2H2 ZF family TFs
Other Amborella trichopoda TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr11G02230_001 Musa acuminata GSMUA_Achr11G02230_001 N 0.807
POPTR_0004s22670 Populus trichocarpa POPTR_0004s22670 N 0.802
PRUPE_ppa019036mg Prunus persica PRUPE_ppa019036mg N 0.802
OS04G0165200 Oryza sativa OS04G0165200 N 0.802
ORUFI04G02970 Oryza rufipogon ORUFI04G02970 N 0.802
OPUNC04G02200 Oryza punctata OPUNC04G02200 N 0.802
gene01102-v1.0-hybrid Fragaria vesca gene01102-v1.0-hybrid N 0.802
Eucgr.J00391 Eucalyptus grandis Eucgr.J00391 N 0.802
BGIOSGA015622 Oryza indica BGIOSGA015622 N 0.802
Ciclev10029984m.g Citrus clementina Ciclev10029984m.g N 0.802
cassava27114.m1 Manihot esculenta cassava27114.m1 N 0.802
cassava28521.m1 Manihot esculenta cassava28521.m1 N 0.802
Pm001162 Prunus mume Pm001162 N 0.802
mgf025993m Mimulus guttatus mgf025993m N 0.802
TCM_041585 Theobroma cacao TCM_041585 N 0.802
Ciclev10029807m.g Citrus clementina Ciclev10029807m.g N 0.802
ONIVA08G18580 Oryza nivara ONIVA08G18580 N 0.802
ORGLA04G0016600 Oryza glaberrima ORGLA04G0016600 N 0.802
GLYMA12G30285 Glycine max GLYMA12G30285 N 0.802
MDP0000224892 Malus domestica MDP0000224892 N 0.802
orange1.1g042026m.g Citrus sinensis orange1.1g042026m.g N 0.802
orange1.1g044007m.g Citrus sinensis orange1.1g044007m.g N 0.802
SapurV1A.0360s0140 Salix purpurea SapurV1A.0360s0140 N 0.802
OBART04G02230 Oryza barthii OBART04G02230 N 0.802
MDP0000610922 Malus domestica MDP0000610922 N 0.802
OGLUM04G01880 Oryza glumaepatula OGLUM04G01880 N 0.802
OMERI04G02190 Oryza meridionalis OMERI04G02190 N 0.802
Gorai.009G090000 Gossypium raimondii Gorai.009G090000 N 0.802
Gorai.006G104700 Gossypium raimondii Gorai.006G104700 N 0.800
OGLUM08G25260 Oryza glumaepatula OGLUM08G25260 N 0.798
ORUFI08G26260 Oryza rufipogon ORUFI08G26260 N 0.798
GSMUA_Achr1G15330_001 Musa acuminata GSMUA_Achr1G15330_001 N 0.797
Cucsa.200410 Cucumis sativus Cucsa.200410 N 0.796
Cla001892 Citrullus lanatus Cla001892 N 0.796
GLYMA13G39610 Glycine max GLYMA13G39610 N 0.796
chr3.CM0070.360.nc Lotus japonicus chr3.CM0070.360.nc N 0.793
PGSC0003DMG400000419 Solanum tuberosum PGSC0003DMG400000419 N 0.792
Solyc11g066420.1 Solanum lycopersicum Solyc11g066420.1 N 0.792
Eucgr.B03926 Eucalyptus grandis Eucgr.B03926 N 0.792
Ca_07000 Cicer arietinum Ca_07000 N 0.792
29589.m001269 Ricinus communis 29589.m001269 N 0.787
Sb07g023890 Sorghum bicolor Sb07g023890 N 0.784
OPUNC08G21710 Oryza punctata OPUNC08G21710 N 0.784
LPERR08G20460 Leersia perrieri LPERR08G20460 N 0.784
Si013894m.g Setaria italica Si013894m.g N 0.784
OB08G30610 Oryza brachyantha OB08G30610 N 0.784
Aquca_009_01096 Aquilegia coerulea Aquca_009_01096 N 0.778
VIT_06s0061g00780 Vitis vinifera VIT_06s0061g00780 N 0.778
GLYMA12G08680 Glycine max GLYMA12G08680 N 0.778
Pavir.Fb02219 Panicum virgatum Pavir.Fb02219 N 0.774
BGIOSGA026480 Oryza indica BGIOSGA026480 N 0.774
Pavir.Fa00049 Panicum virgatum Pavir.Fa00049 N 0.774
OLONG_023180 Oryza longistaminata OLONG_023180 N 0.774
TRIUR3_12142 Triticum urartu TRIUR3_12142 N 0.774
OS08G0562300 Oryza sativa OS08G0562300 N 0.774
ORGLA08G0191700 Oryza glaberrima ORGLA08G0191700 N 0.774
OMERI08G18590 Oryza meridionalis OMERI08G18590 N 0.774
BRADI3G12490 Brachypodium distachyon BRADI3G12490 N 0.768
GLYMA11G19810 Glycine max GLYMA11G19810 N 0.764