STOP1 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT1G34370 T080833_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STOP1
M06801_2.00
Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY

RRGKDDYAHCTGGKGVAGG
Dap-seq
OMalley et al.(2016)
STOP1_col_a
(Direct) (Direct)
STOP1
M06802_2.00
Arabidopsis thaliana
RCCTNCMCCRGWWRN

NYWWCYGGKGNAGGY
Dap-seq
OMalley et al.(2016)
STOP1_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G34370.1 C2H2 ZF 333 355
AT1G34370.1 C2H2 ZF 354 385
AT1G34370.2 C2H2 ZF 333 355
AT1G34370.2 C2H2 ZF 354 385
AT1G34370.3 C2H2 ZF 123 145
AT1G34370.3 C2H2 ZF 144 175

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000016347 Ailuropoda melanoleuca ENSAMEG00000016347 I 0.000
ENSACAG00000003946 Anolis carolinensis ENSACAG00000003946 I 0.000
ENSAMXG00000004911 Astyanax mexicanus ENSAMXG00000004911 I 0.000
ENSAMXG00000016370 Astyanax mexicanus ENSAMXG00000016370 I 0.000
ENSBTAP00000044267-D1 Bos grunniens ENSBTAP00000044267-D1 I 0.000
IRF9 Bos taurus ENSBTAG00000005816 I 0.000
IRF9 Callithrix jacchus ENSCJAG00000007065 I 0.000
IRF9 Canis familiaris ENSCAFG00000012007 I 0.000
IRF9 Cavia porcellus ENSCPOG00000026474 I 0.000
ENSCSAG00000016071 Chlorocebus sabaeus ENSCSAG00000016071 I 0.000
irf9 Danio rerio ENSDARG00000016457 I 0.000
irf4b Danio rerio ENSDARG00000055374 I 0.000
IRF9 Equus caballus ENSECAG00000024429 I 0.000
IRF9 Felis catus ENSFCAG00000018849 I 0.000
ENSGMOG00000002167 Gadus morhua ENSGMOG00000002167 I 0.000
irf9 Gasterosteus aculeatus ENSGACG00000001697 I 0.000
IRF9 Gorilla gorilla ENSGGOG00000016046 I 0.000
IRF9 Homo sapiens ENSG00000213928 D 0.000
ENSSTOG00000023450 Ictidomys tridecemlineatus ENSSTOG00000023450 I 0.000
ENSLACG00000004633 Latimeria chalumnae ENSLACG00000004633 I 0.000
ENSLOCG00000001187 Lepisosteus oculatus ENSLOCG00000001187 I 0.000
IRF9 Loxodonta africana ENSLAFG00000026182 I 0.000
ENSP00000380073 Macaca fascicularis ENSP00000380073 I 0.000
ENSMMUG00000012474 Macaca mulatta ENSMMUG00000012474 I 0.000
ENSMEUG00000010784 Macropus eugenii ENSMEUG00000010784 I 0.000
ENSMPUG00000005961 Mustela putorius furo ENSMPUG00000005961 I 0.000
Irf9 Mus musculus ENSMUSG00000002325 D 0.000
Myotis_brandtii_IRF9_10003711 Myotis brandtii Myotis_brandtii_IRF9_10003711 I 0.000
IRF9 Myotis lucifugus ENSMLUG00000025255 I 0.000
ENSNLEG00000015294 Nomascus leucogenys ENSNLEG00000015294 I 0.000
IRF9 Ochotona princeps ENSOPRG00000018909 D 0.000
ENSONIG00000006624 Oreochromis niloticus ENSONIG00000006624 I 0.000
IRF9 Oryctolagus cuniculus ENSOCUG00000028186 I 0.000
irf9 Oryzias latipes ENSORLG00000013335 I 0.000
IRF9 Otolemur garnettii ENSOGAG00000026670 I 0.000
ENSOARG00000019201 Ovis aries ENSOARG00000019201 I 0.000
IRF9 Pan troglodytes ENSPTRG00000034494 I 0.000
ENSPFOG00000021810 Poecilia formosa ENSPFOG00000021810 I 0.000
Pvit_14926 Pogona vitticeps Pvit_14926 I 0.000
ENSPPYG00000005686 Pongo abelii ENSPPYG00000005686 I 0.000
IRF9 Procavia capensis ENSPCAG00000015500 I 0.000
IRF9 Pteropus vampyrus ENSPVAG00000007716 I 0.000
Irf9 Rattus norvegicus ENSRNOG00000019478 I 0.000
ENSSHAG00000001872 Sarcophilus harrisii ENSSHAG00000001872 I 0.000
IRF9 Sus scrofa ENSSSCG00000002002 D 0.000
irf9 Takifugu rubripes ENSTRUG00000017722 I 0.000
irf4b Takifugu rubripes ENSTRUG00000002946 I 0.000
ENSTSYG00000007445 Tarsius syrichta ENSTSYG00000007445 I 0.000
irf9 Tetraodon nigroviridis ENSTNIG00000008698 I 0.000
ENSTNIG00000002469 Tetraodon nigroviridis ENSTNIG00000002469 I 0.000
IRF9 Tursiops truncatus ENSTTRG00000008624 I 0.000
IRF8 Tursiops truncatus ENSTTRG00000016024 I 0.000
XP_002934991 Xenopus tropicalis XP_002934991 I 0.000
ENSXMAG00000004567 Xiphophorus maculatus ENSXMAG00000004567 I 0.000