AT2G48100 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT2G48100 T080850_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G48100
M06812_2.00
Arabidopsis thaliana
TGGTGA

TCACCA
Dap-seq
OMalley et al.(2016)
At2g48100_col_b
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G48100.4 C2H2 ZF 17 41
AT2G48100.5 C2H2 ZF 17 41

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh2_kg.4__3062__AT2G48100.3 Arabidopsis lyrata fgenesh2_kg.4__3062__AT2G48100.3 I 0.827