AZF3 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT5G43170 T080883_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZAT6
M00861_2.00
Arabidopsis thaliana
NNHRSTN

NASYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT6
0.816 0.891
ZAT10
M01852_2.00
Arabidopsis thaliana
NNHASWN

NWSTDNN
PBM
Weirauch et al.(2014)
pTH7255
0.809 0.848
ZAT10
M06799_2.00
Arabidopsis thaliana
WSHHCACT

AGTGDDSW
Dap-seq
OMalley et al.(2016)
STZ_colamp_a
0.809 0.848
ZAT10
M06800_2.00
Arabidopsis thaliana
YWSHNHCASTN

NASTGDNDSWR
Dap-seq
OMalley et al.(2016)
STZ_col
0.809 0.848
AZF2
M01854_2.00
Arabidopsis thaliana
NASTRNN

NNYASTN
PBM
Weirauch et al.(2014)
pTH8258
0.792 0.804
AZF1
M01860_2.00
Arabidopsis thaliana
NWSYDNN

NNHRSWN
PBM
Weirauch et al.(2014)
pTH7163
0.780 0.826
AZF1
M06826_2.00
Arabidopsis thaliana
WCACTVWCWNH

DNWGWBAGTGW
Dap-seq
OMalley et al.(2016)
AZF1_colamp_a
0.780 0.826
ZAT9
M06817_2.00
Arabidopsis thaliana
YTACTWHH

DDWAGTAR
Dap-seq
OMalley et al.(2016)
At3g60580_col_a
0.769 0.696
ZAT4
M01168_2.00
Arabidopsis thaliana
NNHRSTN

NASYDNN
PBM
Lambert et al.(2019)
pTH11142
0.769 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G43170.1 C2H2 ZF 75 97
AT5G43170.1 C2H2 ZF 118 140

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB009209 Anopheles albimanus AALB009209 N 0.000
AARA001745 Anopheles arabiensis AARA001745 N 0.000
AATE000737 Anopheles atroparvus AATE000737 N 0.000
ACHR006808 Anopheles christyi ACHR006808 N 0.000
ACOM033873 Anopheles coluzzii ACOM033873 N 0.000
ACUA015970 Anopheles culicifacies ACUA015970 N 0.000
ACYPI001093 Acyrthosiphon pisum ACYPI001093 N 0.000
ADAC008723 Anopheles darlingi ADAC008723 N 0.000
AEPI009643 Anopheles epiroticus AEPI009643 N 0.000
AFAF013901 Anopheles farauti AFAF013901 N 0.000
AFUN003046 Anopheles funestus AFUN003046 N 0.000
AGAP001277 Anopheles gambiae AGAP001277 N 0.000
AMEC001300 Anopheles melas AMEC001300 N 0.000
AMEM002527 Anopheles merus AMEM002527 N 0.000
AMIN002205 Anopheles minimus AMIN002205 N 0.000
ASIS016921 Anopheles sinensis ASIS016921 N 0.000
ASTEI05803 Anopheles stephensi ASTEI05803 N 0.000
CG5934 Drosophila melanogaster FBgn0039505 N 0.000
GA19242 Drosophila pseudoobscura FBgn0079239 N 0.000
GF16281 Drosophila ananassae FBgn0093303 N 0.000
GG11541 Drosophila erecta FBgn0103838 N 0.000
GI22257 Drosophila mojavensis FBgn0144985 N 0.000
GL24486 Drosophila persimilis FBgn0162075 N 0.000
GM10383 Drosophila sechellia FBgn0165333 N 0.000
GD15135 Drosophila simulans FBgn0186806 N 0.000
GJ24048 Drosophila virilis FBgn0211135 N 0.000
GK22576 Drosophila willistoni FBgn0224553 N 0.000
GE23729 Drosophila yakuba FBgn0240887 N 0.000
KGM_08541 Danaus plexippus KGM_08541 N 0.000
LDEC000234 Leptinotarsa decemlineata LDEC000234 N 0.000
LLOJ006065 Lutzomyia longipalpis LLOJ006065 N 0.000