CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT5G60470
(
Arabidopsis thaliana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AT5G60470
T080888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G60470.1
C2H2 ZF
141
162
WKCDKCSKKYAVISDWKAHNKI
AT5G60470.1
C2H2 ZF
161
188
KICGSREFRCDCGTLFSRKDSFISHRSF
AT5G60470.2
C2H2 ZF
150
171
WKCDKCSKKYAVISDWKAHNKI
AT5G60470.2
C2H2 ZF
170
197
KICGSREFRCDCGTLFSRKDSFISHRSF
AT5G60470.3
C2H2 ZF
146
167
WKCDKCSKKYAVISDWKAHNKI
AT5G60470.3
C2H2 ZF
166
193
KICGSREFRCDCGTLFSRKDSFISHRSF
Links
Other
C2H2 ZF
family TFs
Other
Arabidopsis thaliana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.2519s0019
Capsella grandiflora
Cagra.2519s0019
N
0.797
Bostr.26833s0192
Boechera stricta
Bostr.26833s0192
N
0.797
Carubv10026480m.g
Capsella rubella
Carubv10026480m.g
N
0.774