CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIBMGA006120
(
Bombyx mori
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BGIBMGA006120
T081328_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cbt
M03705_2.00
Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH
SELEX
Nitta et al.(2015)
cbt_1
0.760
0.797
cbt
M03706_2.00
Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY
SELEX
Nitta et al.(2015)
cbt_2
0.760
0.797
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA006120-TA
C2H2 ZF
237
261
YECSYPGCGKNYFKSSHLKAHARTH
BGIBMGA006120-TA
C2H2 ZF
267
291
FRCAWPGCERRFSRSDELSRHKRTH
BGIBMGA006120-TA
C2H2 ZF
297
319
FECRVCNRRFMRSDHLAKHVKRH
Links
Other
C2H2 ZF
family TFs
Other
Bombyx mori
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy