Bo5g008880 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo5g008880 T081746_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g008880.1 C2H2 ZF 266 287
Bo5g008880.1 C2H2 ZF 286 312

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra031621 Brassica rapa Bra031621 N 0.827
Bo8g112550 Brassica oleracea Bo8g112550 N 0.827
Bra018638 Brassica rapa Bra018638 N 0.827
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.817
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.817
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.817
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.817
WIP3 Arabidopsis thaliana AT1G08290 N 0.817
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N 0.811
mgf022981m Mimulus guttatus mgf022981m N 0.806
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.800
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.800
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.800
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.800
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.799
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.799
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.793
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.793
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.793
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.793
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.792
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.792
TT1 Vitis vinifera VIT_18s0001g05860 N 0.782
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.782
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.782
29908.m006047 Ricinus communis 29908.m006047 N 0.782
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.782
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.782
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.782
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.782
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.782
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.782
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.782
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.782
Cla000184 Citrullus lanatus Cla000184 N 0.782
TCM_034881 Theobroma cacao TCM_034881 N 0.782
Ca_27078 Cicer arietinum Ca_27078 N 0.782
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.782
MDP0000573922 Malus domestica MDP0000573922 N 0.780
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.779
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.779
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.779
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.779
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.779
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.775
Ca_07051 Cicer arietinum Ca_07051 N 0.775
30055.m001542 Ricinus communis 30055.m001542 N 0.775
Pm001374 Prunus mume Pm001374 N 0.775
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.775
MDP0000300013 Malus domestica MDP0000300013 N 0.775
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.775
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.775
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.775
MDP0000131949 Malus domestica MDP0000131949 N 0.775
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.775
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.775
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.775
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.775
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.775
Ca_16482 Cicer arietinum Ca_16482 N 0.775
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.775
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.775
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.775
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.775
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.775
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.775
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.775
TCM_041441 Theobroma cacao TCM_041441 N 0.775
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.775
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.769
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.769
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.769
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.769
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.769
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.769
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.769
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.769
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.769
mgf022319m Mimulus guttatus mgf022319m N 0.769
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.769
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.769
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.769
30061.m000294 Ricinus communis 30061.m000294 N 0.769
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.769
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.769
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.769
TCM_005892 Theobroma cacao TCM_005892 N 0.769
Cla015481 Citrullus lanatus Cla015481 N 0.769
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.769
PK05257.1 Cannabis sativa PK05257.1 N 0.769
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N 0.765
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N 0.764
MDP0000144266 Malus domestica MDP0000144266 N 0.763
Bo5g081360 Brassica oleracea Bo5g081360 N 0.763
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.762
MDP0000142494 Malus domestica MDP0000142494 N 0.761
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.760
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N 0.759
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N 0.759
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.759
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.759
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.759
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.759
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.759
OB08G26650 Oryza brachyantha OB08G26650 N 0.759
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.759
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.759
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.759
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.759
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.759
OS08G0504000 Oryza sativa OS08G0504000 N 0.759
Si013819m.g Setaria italica Si013819m.g N 0.759
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.759
OS09G0485600 Oryza sativa OS09G0485600 N 0.759
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.759
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.759
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.759
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.759
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.759
OBART08G19670 Oryza barthii OBART08G19670 N 0.759
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.759
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.759
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.759
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.759
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.759